Radiomics Tools

Image processing tools and ruffus based pipeline for radiomics feature analysis

• Github repository
  https://github.com/taznux/radiomics-tools/
• First release 0.1 with OSX binary
  https://github.com/taznux/radiomics-tools/releases/tag/release/0.1
• Test dataset –
  https://wiki.cancerimagingarchive.net/display/Public/SPIE-AAPM+Lung+CT+Challenge

Publications

1. Wookjin Choi, Jung Hun Oh, Sadegh Riyahi, Chia-Ju Liu, Feng Jiang, Wengen Chen, Charles White, Andreas Rimner, James G. Mechalakos, Joseph O. Deasy, and Wei Lu, “Radiomics analysis of pulmonary nodules in low-dose CT for early detection of lung cancer”, Medical Physics, Vol. 45, No. 4, pp. 1537-1549, April 2018. https://doi.org/10.1002/mp.12820 
2. Wookjin Choi, Sadegh Riyahi, Seth J. Kligerman, Chia-Ju Liu, James G. Mechalakos and Wei Lu, “Technical Note: Identification of Normal Lung CT Texture Features Robust to Tumor Size for the Prediction of Radiation-Induced Lung Disease”, International Journal of Medical Physics, Clinical Engineering and Radiation Oncology, Vol.7 No.3, Paper ID 86485, pp. 330-338, August 2018. doi:10.4236/ijmpcero.2018.73027
3. Sadegh Riyahi, Wookjin Choi, Chia-Ju Liu, Hualiang Zhong, Abraham J Wu, James G Mechalakos, Wei Lu, “Quantifying local tumor morphological changes with Jacobian map for prediction of pathologic tumor response to chemo-radiotherapy in locally advanced esophageal cancer”, Physics in Medicine and Biology, Vol. 63, No. 14, 145020 (13pp), July 2018. doi:10.1088/1361-6560/aacd22